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Electronic publishing: Delivering the Goods to the Public
Contents...
The contents of biosystematic information can be view from the user
perspective (see biosystematic
information) or that of the producers, taxonomists.
Traditionally, taxonomists have presented their results as
monographs and revisions. The components of these publications and
how we envision their translation into electronic format are as
follows:
Title Page: This is the initial (logon) screen that the user
sees when they access the digital medium via gopher (top menu),
World Wide Web (WWW; home page) server, or a program loaded from
CD-ROM.
Table of Contents: This translates into the menu of options
that the user can select from. This will frequently be a
hierarchical series of menus (linked HTML pages), the first of
which is part of the logon screen.
Introduction: This will be an ASCII text file (or series of
text files) marked up according to the appropriate "hypertext"
markup language (HTML).
Acknowledgments: This will also be an ASCII text file.
Keys: These will be replaced by an expert identification
system. They use DELTA datafiles (ONLINE). The datafiles for the
identification program may be separate from those of the
phylogenetic program (see below) as not all characters are useful
for both functions. While markup languages allow for the
traditional key to be used in a digital environment, the hypertext
format still restricts the user to a predefined path through the
characters (if you don't know the first or subsequent characters,
you are stuck at that point). Hence, this approach will only be
used in those environments (Internet) where more interactive
programs are not supported. Currently, the keys available on the
WWW are largely static HTML pages, but research is underway to made
a JAVA application to server DELTA datafiles as truly interactive
keys (Contact Mike Dallwitz of Entomology, CSIRO, Canberra,
Australia miked@ento.csiro.au.
Phylogeny & Biogeography: The analyses will be included in
marked-up ASCII text files, but the supporting data will be
included as character ß taxa (phylogenetic) or taxa ß area
(biogeography) matrices. The preferred cladograms and maps will
also be stored as images.
Taxonomic descriptions: Descriptions will be derived from the
character ß taxa matrices that are available from the previous
sections. Descriptions will also be stored as marked-up ASCII text
files (HTML).
Nomenclature: Will be derived from a database. Predefined
queries will generate the traditional formatted list of names and
nomenclatorial details (literature citations, type material,
status, etc.).
Distribution: Will be derived from a database of specimen
label data. Mapping programs will be included to generate graphic
images of distributions.
Life histories: Will be summarized in marked-up ASCII text
files (HTML), but data on associates, phenology, etc., will be
stored in databases.
Figures: Illustrations of characters, species, distributions,
relationships (cladograms) and any other necessary figures will be
image files.
Bibliography: Will be in the form of a database.
Index: Will not be necessary!
Given the current status of the digital environment, monographs and
revisions will be disseminated both on CD-ROM and over the
Internet. The CD-ROM version will consist of HTML pages, Adobe Acrobat PDF
(portable document file) files, relational databases (FileMakerPro) and expert system (Pankhurst's ONLINE
r.pankhurst@rbge.org.uk. The Internet version will be the same.
The user interface will be provided by browsers, such as Microsoft
Explorer and Netscape Navigator. Short abstract will be printed in
the traditional scientific literature as necessary to meet the
requirements of the International Code of Zoological Nomenclature
(see Electronic dissemination and Zoological
Nomenclature).
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